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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs13431103 chr2:237660959 A/G STK25 chr2:242432089-242449145:- 0.74 6.01 4.25E-9 Box Plot
BLCA rs13432764 chr2:194967858 A/G C2orf47 chr2:200820040-200873263:+ 0.79 5.99 4.71E-9 Box Plot
BLCA rs13432764 chr2:194967858 A/G CFLAR chr2:201980827-202041410:+ 0.62 6.25 1.09E-9 Box Plot
BLCA rs13438583 chr7:140166997 T/C LOC441455 chr9:99488103-99489749:+ 0.49 6.03 3.77E-9 Box Plot
BLCA rs1363405 chr5:176636882 A/G LOC388955 chr2:63849182-63850159:- 0.5 11.47 2.25E-26 Box Plot
BLCA rs1364330 chr16:26359083 T/C C14orf138 chr14:50575350-50583297:- 0.38 6.33 6.74E-10 Box Plot
BLCA rs1364553 chr8:5925196 C/T ERI1 chr8:8859657-8974256:+ 0.47 6.58 1.59E-10 Box Plot
BLCA rs1364553 chr8:5925196 C/T VPS37A chr8:17104080-17159936:+ 0.45 6.61 1.28E-10 Box Plot
BLCA rs1367753 chr18:73812300 A/G TXNL4A chr18:77730811-77793949:- 0.66 5.95 5.93E-9 Box Plot
BLCA rs1369058 chr18:44998839 C/T ATP5A1 chr18:43660214-43684300:- 0.78 6.83 3.35E-11 Box Plot
BLCA rs1369058 chr18:44998839 C/T C18orf25 chr18:43753519-43846954:+ 0.76 6.47 2.95E-10 Box Plot
BLCA rs1369058 chr18:44998839 C/T C18orf54 chr18:51884287-51911588:+ 0.67 6.17 1.76E-9 Box Plot
BLCA rs1369058 chr18:44998839 C/T HAUS1 chr18:43684298-43708299:+ 0.8 7.24 2.44E-12 Box Plot
BLCA rs1369058 chr18:44998839 C/T KIAA1632 chr18:43427575-43547305:- 0.74 6.3 8.04E-10 Box Plot
BLCA rs1369058 chr18:44998839 C/T LOC400657 chr18:72259012-72265071:- 0.85 6.97 1.42E-11 Box Plot